Supplementary material for:

 

Heenam Kim, Baoping Zhao, Erik C. Snesrud, Brian J. Haas, Christopher D. Town, and John Quackenbush. Use of RNA and genomic DNA references in DNA microarray analyses. Submitted to Nucleic acids research.

 

• Total RNA Extraction from Plant Tissue by Trizol (PDF)
• Total RNA Extraction from Plant Tissue by Trizol with Protein and Carbohydrate Removal (PDF)
• Protocol for labeling genomic DNA reference sample (PDF)
• TIGR standard operating procedure (SOP) for cDNA clone growth and template miniprepping (PDF)
• TIGR SOP for PCR, purification, and storage (PDF)
• TIGR SOP for making microarray printing plates (PDF)
• TIGR SOP for aminoallyl labeling of RNA for microarrays (PDF)
• TIGR SOP for microarray labeled probe hybridization (PDF)
• Supplementary data for Fig. 5. (PDF) enlarge browser window to view text